Users
Below you will find an alphabetical list of ontologies and institutions/groups using BFO.
Ontologies
-
(EXperimental ACTions) Biomedical Protocol Ontology (EXACT2)
-
(Microbial) Typing Ontology (TypOn)
-
ACGT Master Ontology (ACGT MO)
-
Actionable Intelligence Retrieval System (AIRS)
-
Addiction Ontology (AO)
-
Additive Manufacturing Ontology (AMO)
-
Adolescent Depression Ontology (ADO)
-
Adverse Event Reporting Ontology (AERO)
-
AFO Foundational Ontology
-
African Wildlife Ontology (AWO)
-
Agronomic Linked Data (AgroLD)
-
Agronomy Ontology (AGRO)
-
Algorithm-Implementation-Execution Ontology Design Pattern
-
Alzheimer Disease Ontology (ADO)
-
Alzheimer's Disease Diagnosis Ontology (ADDO)
-
Anatomy of the Insect Skeleto-Muscular system ontology (AISM)
-
Animals in Context Ontology (ACO)
-
Antimicrobial-Microorganism Ontology
-
Apollo Structured Vocabulary (Apollo-SV)
-
ARIES (Arkansas Imaging Enterprise System) Knowledge Graph
-
Asset Management Ontology (AMODO)
-
Autism-DSM-ADI-R Ontology (ADAR)
-
Bacterial Clinical Infectious Diseases Ontology (BCIDO)
-
Bank Ontology
-
Battle Management Ontology (BMO)
-
Behavior Change Intervention Ontology (BCIO)
-
Behavior Perspective Model (BPM)
-
Beta Cell Genomics Application Ontology (BCGO)
-
Bio-Knowledge Network Ontology (BioKNO)
-
BioAssay Ontology
-
Bioinformatics Web Service Ontology (OBIWS)
-
Biological Collections Ontology (BCO)
-
Biomedical Ethics Ontology
-
Biomedical Grid Terminology (BiomedGT, retired)
-
Biomedical Study - Lifecycle Management (BMS-LM) core ontology
-
Biomimetic Ontology
-
BioTop
: a biomedical top-domain ontology
-
Body Fluids Ontology (BFLO)
-
Bone Dysplasia Ontology (BDO)
(see also
here
)
-
Cancer Cell Ontology (OncoCL)
-
Cancer Chemoprevention Ontology (CanCo)
-
Cardiovascular Disease Ontology (CVDO)
-
Case Based Reasoning (CBR) Ontology
-
Categorical Temporal Phenomenology
-
Cell Behavior Ontology (CBO)
-
Cell Culture Ontology (CCONT)
-
Cell Cycle Ontology
-
Cell Expression, Localization, Development and Anatomy Ontology (CELDA)
-
Cell Line Ontology (CLO)
-
Cell Ontology
: designed as a structured controlled vocabulary for cell types
-
Cellular Microscopy Phenotype Ontology (CMPO)
-
Chemical Analysis Ontology (CAO)
-
Chemical Entities of Biological Interest (ChEBI)
-
Chemical Information Ontology (CHEMINF)
-
Chemical Methods Ontology (CHMO)
-
CHRONIOUS Ontology Suite
-
CICCONETO et al., 2020; CICCONETO, 2021) spatial relations ontology
-
CIDO-COVID-19
-
Cigarette Smoke Exposure Ontology (CSEO)
-
Clinical Data Integration Model (CDMO)
-
Clinical Narrative Temporal Relation Ontology (CNTRO)
-
Clinical Trial Protocol Ontology (CTP-O)
-
Clusters of Orthologous Groups (COG) Analysis Ontology (CAO)
-
Cognition-Guided Surgery (CGS) Ontology
-
Cognitive Paradigm Ontology (COGPO)
-
Cognitive Process Ontology (CPO)
-
Collaborative Learning Healthcare Systems (CLHS) ontology
-
Common Anatomy Reference Ontology (CARO)
: anatomical structures in all organisms
-
Common Core Cyber Ontology (C3O)
-
Common Core Ontologies (CCO)
-
Communication Standards Ontology (CSO)
-
Comparative Data Analysis Ontology (CDAO)
-
Computational Neuroscience Ontology (CNO)
-
Computer Aided Engineering Modeling Language (CAEML) Ontology
-
Computer-Based Patient Record Ontology (CPRO)
-
Conceptual Model Ontology (CMO)
-
Core Data Integration Model (CDIM)
-
Coriell Cell Line Ontology
-
Coronavirus Infectious Disease Ontology (CIDO)
-
CPR Ontology for the Institute of Medicine's (IOM) Computer-Based Patient Record Ontology
-
Crop Planning and Production Process Ontology (C3PO)
-
CybOnto (Cognitive Digital Twin Ontology for CyberSecurity)
-
Cybonto Cyber Security Ontology
-
Dairy Cattle Performance Ontology (DCPO)
-
Data Integration Aggregated Model for Nuclear Deployment (DIAMOND)
-
Data Model for Representing Biographical Information for Prosopography (Bio-CRM)
-
Data Use Ontology (DUO)
see also
here
-
Decision Ontology
-
Diabetes mellitus Diagnosis Ontology (DDO)
-
Diabetes Mellitus Treatment Ontology (DMTO)
-
Digital Objects in Philosophy Ontology (DOPHO)
-
Document Act Ontology (D-Acts)
-
Drug Interaction Ontology (DIO)
-
Drug Ontology (DrOn)
-
Drug Repurposing Ontology (DRO)
-
Drug-drug Interaction Evidence Ontology (DIDEO)
-
Drug-drug Interaction Ontology (DINTO)
-
Eagle-I Research Resource Ontology (ERO)
-
EifcOWL (Enhanced Ontology for the Construction Industry Foundation Classes)
see also
here
-
Electrocardiography Ontology (ECG)
-
Eligibility Criteria Ontology (EC-O)
-
Email Ontology
-
Emotion Ontology (EMO)
: an ontology to describe affective phenomena
-
ENanoMapper (ENM)
-
End of Life (EoL) Domain Ontology
-
Engineering-to-BioMimetic Ontology (E2BMO)
-
Environment Ontology
-
ENVOn (3D shape ontology)
-
Epidemiology Ontology (EPO)
-
Epilepsy and Seizure Ontology (EPSO)
-
Epilepsy Ontology (EPIO)
-
European Materials Modeling Ontology (EMMO)
-
Event-Based Functional Behavior Ontology (EFBO)
-
Event-Based Ontology for Historical Description (EOHD)
-
Evolution Ontology (EO)
-
Experimental Factor Ontology (EFO)
-
Exposé
: an ontology for data mining experiments)
-
eXtended Formal Ontology (XFO)
-
FASTO Ontology (incorporates BFO, FHIR, CPG,and SSN)
-
Feedback Intervention Ontology (FIO)
-
Financial Documents Ontology (FIN)
-
Fission Yeast Phenotype Ontology (FYPO)
-
Flower-Visiting Domain Ontology (FV), Known Flower-Visiting Group Domain Ontology (KFG), Flower-Visiting Behavior Application Ontology (FVB) and Observation-Date Application Ontology (OBD)
-
Flybase Drosophila Anatomy Ontology (DAO)
-
Flybase Drosophila Phenotype Ontology (FYPO)
-
Food Ontology (FoodOn)
-
Food Recipe Ingredient Substitution Ontology (FRISO)
-
Food-Energy-Water Systems Ontology (FEWsONT)
-
Foundational Model of Anatomy (FMA)
-
Framework for Semantic Workflow Composition in the Geology Domain
-
Gastrointestinal Endoscopy Ontology (GIEO)
-
Gender, Sex, and Sexual Orientation (GSSO) ontology
-
Gene Ontology (GO)
-
Gene Regulation Ontology (GRO)
-
General Information Model (GIM)
-
Genomic Epidemiology Ontology (GenEpiO)
-
Genomic Feature and Variation Ontology (GFVO)
-
GeoCore Geology Ontology
see also
here
-
Geographical Entity Ontology (GEO)
-
GeoReservoir Ontology
-
GeoReservoir ontology for deep-marine depositional system geometry
-
Gestalt
: Federated Access to Cyber Observables for Detection of Targeted Attack
-
Global Electronic Health Record Ontology (G-EHR-O)
-
Graphs, Objects, Points, Properties, Roles, and Relationships Ontology (GOPPRRE)
with extensions
-
Health Data Ontology Trunk (HDOT)
-
Hemocomponents and Hemoderivatives Ontology (HEMONTO)
-
HERMES 4D Printing Ontology
-
Host Pathogen Interactions Ontology (HPO)
-
Human Activity and Infrastructure Foundry (HAIF)
-
Human Disease Ontology (DOID)
-
Human Experience Realist Ontology (HERO)
-
Human Interaction Network Ontology (HINO)
-
Human Physiology Simulation Ontology (HuPSON)
(see also
here
)
-
Infectious Disease Ontology
-
Information Artifact Ontology (IAO)
-
Information Security Domain (ISD) ontology
-
Informed Consent Ontology (ICO)
-
Innovative Capabilities of Additive Manufacturing (ICAM) Ontology
-
Integrated Framework for Additively Manufactured Products (IFAMP) ontology
-
Interaction Network Ontology (INO)
-
Interdisciplinary Prostate Ontology Project (IPOP)
-
International Center for Food Ontology, Operability, Data and Semantics (IC-FOODS)
-
uc_Eating
: an ontology for the characterization of eating, drinking and otherwise consuming foods
-
uc_FoodDrugInteractionOntology
: an ontology for the characterization of interactions between foods and drugs
-
uc_Milk
: an ontology for the characterization of mammalian milks
-
uc_Processing
: an ontology for the characterization of processing methods and the products they engender
-
uc_Sense
: an ontology for the characterization of sensory perception, qualities, and attributes
-
Intervention Setting Ontology
-
Intracranial Aneurysm (ICA) Ontology
-
Iranian Traditional Medicine General Ontology (IrGO)
-
Knowledge Base Of Biomedicine (KaBOB)
-
Knowledge Object Reference Ontology (KORO)
-
Library of Integrated Network-based Cellular Signatures
-
Lipid Ontology
-
Literary Theme Ontology (LTO)
-
Machine Learning Schema (ML-Schema) ontology
-
Maintenance Activity Reference Ontology
-
Major histocompatibility complex (MHC) Restriction Ontology (MRO)
-
Malaria Ontology (IDOMAL)
-
Manufacturing Service Description Language (MSDL) ontology
-
Manufacturing Supply Chain Ontology (MSCO)
-
Medication Adherence Behavior Ontology (MAB-Ontology)
-
Mental Disease Ontology (MFO-MD)
-
Mental Functioning Ontology (MF)
-
Microbiology Ontology (MicrO)
-
Middle Layer Ontology for Clinical Care (MLOCC)
-
Military Ontology
-
Military Scenario Ontology (MSO)
-
Minimum Information Model for Patient Safety (MIMPS)
-
miRNAO
: an Ontology Unfolding the Domain of microRNAs
-
MIRO and IRbase
: IT Tools for the Epidemiological Monitoring of Insecticide Resistance in Mosquito Disease Vectors
-
Mission and Means Framework (MMF) Ontology
-
MOCA (Multi-attribute Ontology-based Criticality Analysis)
-
Modal Relation Ontology (MRO)
-
Mode of Delivery (MoD) Ontology
-
Model for Clinical Information (MCI)
-
Model for Describing Insect Anatomical Structures (MoDIAS)
-
Modular Environmental Modeling Ontology (MEMOn)
-
Mouse Pathology Ontology (MPATH)
-
Name Reaction Ontology (RXNO)
-
Nanoparticle Ontology (NPO)
: Ontology for Cancer Nanotechnology Research
-
Nanoparticles Impact on Human Cell morphology Ontology (NIHCO)
-
Neomark Oral Cancer Ontology (NEOMARK4)
-
Neural Electromagnetic Ontologies (NEMO)
: Ontology-based Tools for Representation and Integration of Event-related Brain Potentials
-
NeuroPsychological Testing Ontology (NPT)
-
Neuroscience Information Framework
(see also
here
)
-
NMR-Instrument Component of Metabolomics Investigations Ontology
-
Non-Coding RNA Ontology (NCRO)
-
OBDMR: An Ontology-Based Data Model for Railways
-
OBR Scolio (scoliosis) ontology
-
Ocular Disease Ontology (ODO)
-
Ocular Immune-Mediated Inflammatory Diseases Ontology (OcIMIDo)
-
OncoCL-KB
: Knowledgebase for Integration of Clinical and Molecular Cancer Data
-
OntoAlign++
: A Combined Strategy for Improving Ontologies Alignment
-
OntoDM Core
-
OntoForInfoScience
-
Ontologies for Representing Surgical Procedure Models (OntoSPM)
-
Ontologized Minimum Information About BIobank data Sharing (OMIABIS)
-
Ontology Based Clinical Decision Support System for Geriatrics
-
Ontology Based Decision Support System for Tuberculosis Management and Control
-
Ontology for Adverse Events (OAE)
-
Ontology for Autism Spectrum Disorder
-
Ontology for Biobanking (OBIB)
-
Ontology for Biomedical Investigations (OBI)
-
Ontology for Cancer research variables (OCRV)
-
Ontology for Computable Eligibility Criteria - Hepatitis C Virus (OCEC-HCV)
-
Ontology for Dengue Fever (IDODEN)
-
Ontology for Documentation of Variable/Data Source Selection (ODVDS)
-
Ontology for Drug Discovery Investigations (DDI)
-
Ontology for Energy Investigations (OEI)
-
Ontology for Functionally Graded Materials (OFGM)
-
Ontology for General Medical Science (OGMS)
-
Ontology for Genes and Genomes - Mouse (OGG-MM)
-
Ontology for Genetic Interval (OGI)
-
Ontology for Guiding Appropriate Antibiotic Prescribing
-
Ontology for Information Science (OntoforInforScience)
-
Ontology for Laparoscopic Surgeries (LapOntoSPM)
-
Ontology for MIcroRNA Target Prediction (OMIT)
(
here
)
-
Ontology for Newborn Screening and Translational Research (ONSTR)
-
Ontology for Next Generation Sequencing Experiments (NGS Ontology)
-
Ontology for Nutritional Epidemiology (ONE)
-
Ontology for Nutritional Studies (ONS)
-
Ontology for Pain and Related Disability, Mental Health and Quality of Life (OPMQoL)
-
Ontology for Parasite LifeCycle (OPL)
-
Ontology for Periodontitis (PERIO)
-
Ontology for Stem Cell Investigations (OSCI)
-
Ontology for Thoracentesis
-
Ontology of Arthropod Circulatory Systems (OArCS)
-
Ontology of Biological and Clinical Statistics (OBCS)
-
Ontology of Cancer Related Socialecological Variables (OCRSEV)
-
Ontology of Card Sleights
-
Ontology of Card Sleights
-
Ontology of Cardiovascular Drug Adverse Events (OCVDAE)
-
Ontology of Chinese Medicine for Rheumatism (OCMR)
-
Ontology of Clinical Research (OCRe)
-
Ontology of Commercial Exchange (OCE)
-
Ontology of Data Mining (OntoDM)
-
Ontology of Datatypes (OntoDT)
-
Ontology of Electronics (OOE)
-
Ontology of Experimental Variables and Values (OOEVV)
-
Ontology of Genes and Genomes (OGG)
-
Ontology of Genetic Disease Investigations (OGDI)
-
Ontology of Genetic Susceptibility Factor (OGSF)
-
Ontology of Hemotherapy (HEMONTO)
-
Ontology of Medical Microbiology (OntoMic)
-
Ontology of Medically Related Social Entities (OMRSE)
-
Ontology of Microbial Phenotypes (OMP)
-
Ontology of Organizational Structures ofTrauma systems and Trauma centers (OOSTT)
-
Ontology of Social Participation (OPS)
-
Ontology of Systems Engineering
-
Ontology of Vaccine Adverse Events (OVAE)
-
Ontology-Based Data Access (OBDA)
-
Ontology-Based eXtensible Data Model (OBX)
-
Ontology-Based Operational Emergency Response (POLARISC)
-
Ontology-Driven Information System (ODIS)/Ontology-Driven Scenario Generator (ODSG)
-
Open Model-Based Engineering Environment (OpenMBEE)
-
Operational Environment Ontology (OEO)
-
Oral Health and Disease Ontology (OHD)
-
Organization Ontology Based on ROR
-
Parasite Experiment Ontology (PEO)
-
Part-Focused Manufacturing Process Ontology (PMPO)
-
Patient Safetry Categorial Structure (PS-CAST)
-
Petrochemical Ontology
-
PGxO Pharmacogenomics Ontology
-
Phenotypic Quality Ontology (PaTO)
: qualities of biomedical entities
-
Physics-Based Simulation Ontology (PSO-Physics and PSO-Sim)
-
Plant Experimental Assay Ontology (PEAO)
-
Plant Ontology (PO)
-
Plastic Rock Deformation (PRD) ontology
-
Pneumonia Ontology
-
POLARISC Emergency Response System Ontology
-
Ponte Ontology Platform (PONTE)
-
Population and Community Ontology (PCO)
-
Population Health Record (PopHR)
-
Porifera Ontology (PORO)
-
Pre-Eclampsia Ontology (PEO)
-
Precision Medicine Ontology (PMO)
-
PreOptique Platform for Integrated Pre-surgery Reports
-
Prescription of Drugs Ontology (PRDO)
-
PRISM: A Platform for Imaging inPrecision Medicine
-
Process and Observation Ontology (PO2)
-
Product Life Cycle Ontology for Additive Manufacturing
-
Product Service System (PSS) Ontology
-
Proper Name Ontology (PNO)
-
PROSPECT-IDR: Personalised Prediction of Infectious Disease Risk
-
Protein Ontology (PRO)
: protein types and modifications classified on the basis of evolutionary relationships
-
Protein-Ligand Interaction Ontology (PLIO)
-
Provenir ontology for provenance modeling
-
Public Safety and Emergency Management (PS/EM) Communications Ontology
-
QROWD urban traffic and mobility ontology
-
Quality of Service (QoS) Ontology
-
Relations Ontology (RO)
-
Reliability Assessment for Assembly Stations (RAAS) Ontology
-
Rescue Ontology (ResOnt)
-
RFID System Configuration Ontology (RFID SCO)
-
RNA Ontology (RnaO)
: RNA features, interactions and motifs
-
Rock Plastic Deformation (RPD) ontology
-
Role Ontology (ROLEO)
-
ROMAIN industrial maintenance ontology
-
Saliva Ontology (SALO)
-
Schistosomiasis Process Ontology (IDOSCHISTO)
-
Scientific Evidence and Provenance Information Ontology (SEPIO)
-
Semantic Electronic Health Record (SEHR) Model
from
Linked2Safety
(see also
here
)
-
Semantic LAminated Composites Knowledge management System (SLACKS)
-
Semantic Reference Model for Individualization of Information Processes
-
Semantic Systems Engineering Ontology (SESO)
-
Semanticscience Integrated Ontology (SIO)
-
Senselab Ontology
with applications to
NeuronDB
and
BrainPharm
-
Sentinel: Platform for Semantic Enrichment of Social Media Streams
-
Sequence Ontology (SO)
: features and properties of nucleic sequences
-
Shop-Floor Digital Twin (DT) ontology
-
Situated and Interactive Multimodal Conversations
-
Situation Awareness Ontology (SAO)
-
Sketch Map Ontology
-
Skin Physiology Ontology (SPO)
-
Sleep Domain Ontology (SDO)
-
SMART Protocols
: SeMAntic RepresenTation for Experimental Protocols
-
Smart Ultrasound in Obstetrics and Gynecology (SUOG) Ontology
-
SNOMED CT (SCT) Standard Ontology
-
Social Psychology Ontology (SPO)
-
Software Ontology (SWO)
-
Software, Disabilities and Competences Ontology (SODIC)
-
Space Domain Ontologies (SDO)
-
Space Object Ontology (SOO)
-
Spatial Graph Adapter (SGA) Ontology Design Pattern
-
Spatial Relation Ontology
-
Spatiotemporal Ontology for the Administrative Units of Switzerland (SONADUS)
-
Special Nuclear Materials Detection Ontology (SNM-DO)
-
Statistics Ontology (STATO)
-
STATO-LMM Linear Mixed Model Ontology
-
Subcellular Anatomy Ontology (SAO)
-
Suggested Ontology for Pharmacogenomics (SO-Pharm)
-
Supply Chain Traceability Ontology
-
Surface Water Ontology (SWO)
-
Survey Ontology
-
Taxonomy for Rehabilitation of Knee Conditions (TRAK)
-
The Common Rule Ontology (CRO)
-
The Trope Ontology
-
Time Event Ontology (TEO)
-
Toxic Process Ontology (TXPO)
-
Trade-Space Analysis Tool for Constellations (TAT-C) ontology
-
Traditional Chinese Drugs Ontology (TCDO)
-
Translational Medicine Ontology (TMO)
-
Transportation System Ontology
-
Tumour-Node-Metastasis Ontology (TNM-O)
-
UMass Engineering Core Ontologies
-
United Nations SDG (Sustainable Development Goals) Ontology Framework
-
United Nations System Document Ontology (ONTO-UNDO)
-
Universal Core Semantic Layer
-
Vaccination Informed Consent Ontology (VICO)
-
Vaccine Ontology (VO)
-
Value Stream Mapping (VSM) Ontology
-
Visualized Emotion Ontology (VEO)
-
Vital Sign Ontology (VSO)
-
VIVO Ontology
-
Volcanism Ontology (VO)
-
Volcanism Ontology (VO)
-
Xenopus Anatomy Ontology (XAO)
-
Xenopus Phenotype Ontology (XPO)
-
yOWL
: ontology-driven knowledge base for yeast biologists
-
ZEMELA Intelligent Agriculture Platform
Institutions, Groups and Projects
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